compbiomed/MetaScope: Tools and functions for preprocessing 16S and metagenomic sequencing microbiome data

This package contains the tools and methods for preprocessing microbiome data. It contains tools for library generation, demultiplexing, alignment, and microbe identification. Is is essentially an R translation of PathoScope 2.0, or MetaScope.

Getting started

Package details

Bioconductor views MicrobiomeData ReproducibleResearch SequencingData
Maintainer
LicenseArtistic-2.0
Version0.0.99
URL https://github.com/compbiomed/metascope https://compbiomed.github.io/metascope-docs/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("compbiomed/MetaScope")
compbiomed/MetaScope documentation built on April 17, 2022, 4:27 a.m.