compbiomed/MetaScope: Tools and functions for preprocessing 16S and metagenomic sequencing microbiome data
This package contains tools and methods for preprocessing microbiome data. Functionality includes library generation, demultiplexing, alignment, and microbe identification. It is in part an R translation of the PathoScope 2.0 pipeline.
Getting started
Browse package contents
Package details |
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| Bioconductor views | MicrobiomeData ReproducibleResearch SequencingData |
| Maintainer | |
| License | GPL (>= 3) |
| Version | 1.3.10 |
| URL | https://github.com/wejlab/metascope https://wejlab.github.io/metascope-docs/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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