API for compbiomed/animalcules
Interactive microbiome analysis toolkit

Global functions
alpha_div_boxplot	Man page Source code
alpha_div_test	Man page Source code
animalcules	Man page
animalcules-package	Man page
counts_to_logcpm	Man page Source code
counts_to_relabu	Man page Source code
df_char_to_factor	Man page Source code
differential_abundance	Man page Source code
dimred_pca	Man page Source code
dimred_pcoa	Man page Source code
dimred_tsne	Man page Source code
dimred_umap	Man page Source code
diversities	Man page Source code
diversities_help	Man page Source code
diversity_beta_NMDS	Man page Source code
diversity_beta_boxplot	Man page Source code
diversity_beta_heatmap	Man page Source code
diversity_beta_test	Man page Source code
do_alpha_div_test	Man page Source code
filter_categorize	Man page Source code
filter_summary_bar_density	Man page Source code
filter_summary_pie_box	Man page Source code
find_biomarker	Man page Source code
find_taxon_mat	Man page Source code
find_taxonomy	Man page Source code
find_taxonomy_300	Man page Source code
gini_simpson	Man page Source code
grep_tid	Man page Source code
inverse_simpson	Man page Source code
is_categorical	Man page Source code
is_integer0	Man page Source code
is_integer1	Man page Source code
mae_pick_organisms	Man page Source code
mae_pick_samples	Man page Source code
pct2str	Man page Source code
percent	Man page Source code
read_pathoscope_data	Man page Source code
relabu_barplot	Man page Source code
relabu_boxplot	Man page Source code
relabu_heatmap	Man page Source code
run_animalcules	Man page Source code
shannon	Man page Source code
simpson_index	Man page Source code
upsample_counts	Man page Source code
write_to_biom	Man page Source code