find_taxon_mat: Find the Taxonomy Information Matrix
In compbiomed/animalcules: Interactive microbiome analysis toolkit
View source: R/find_taxon_mat.R
find_taxon_mat R Documentation
Find the Taxonomy Information Matrix
Description
Find the Taxonomy Information Matrix
Usage
find_taxon_mat(names, taxonLevels)
Arguments
names
Row names of the taxonomy matrix
taxonLevels
Taxon Levels of all tids
Value
taxmat Taxonomy Information Matrix
Examples
ids <- c("ti|54005", "ti|73001", "ti|573", "ti|228277", "ti|53458")
tids <- c("54005", "73001", "573", "228277", "53458")
taxonLevels <- find_taxonomy(tids)
tax_table <- find_taxon_mat(ids, taxonLevels)
compbiomed/animalcules documentation built on Feb. 7, 2024, 12:13 p.m.
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View source: R/find_taxon_mat.R
| find_taxon_mat | R Documentation |
Find the Taxonomy Information Matrix
Description
Find the Taxonomy Information Matrix
Usage
find_taxon_mat(names, taxonLevels)
Arguments
names |
Row names of the taxonomy matrix |
taxonLevels |
Taxon Levels of all tids |
Value
taxmat Taxonomy Information Matrix
Examples
ids <- c("ti|54005", "ti|73001", "ti|573", "ti|228277", "ti|53458")
tids <- c("54005", "73001", "573", "228277", "53458")
taxonLevels <- find_taxonomy(tids)
tax_table <- find_taxon_mat(ids, taxonLevels)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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