alpha_div_test: Get alpha diversity
In compbiomed/animalcules: Interactive microbiome analysis toolkit
View source: R/alpha_div_test.R
alpha_div_test R Documentation
Get alpha diversity
Description
Get alpha diversity
Usage
alpha_div_test(sam_table, alpha_stat)
Arguments
sam_table
A dataframe with 2 cols, richness and condition. Required.
alpha_stat
Wilcoxon rank sum test or T-test for the test
Value
A dataframe
Examples
df_test <- data.frame(
richness = seq_len(10),
condition = c(rep(1, 5), rep(0, 5))
)
alpha_div_test(df_test, alpha_stat = "Wilcoxon rank sum test")
compbiomed/animalcules documentation built on Feb. 7, 2024, 12:13 p.m.
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View source: R/alpha_div_test.R
| alpha_div_test | R Documentation |
Get alpha diversity
Description
Get alpha diversity
Usage
alpha_div_test(sam_table, alpha_stat)
Arguments
sam_table |
A dataframe with 2 cols, richness and condition. Required. |
alpha_stat |
Wilcoxon rank sum test or T-test for the test |
Value
A dataframe
Examples
df_test <- data.frame(
richness = seq_len(10),
condition = c(rep(1, 5), rep(0, 5))
)
alpha_div_test(df_test, alpha_stat = "Wilcoxon rank sum test")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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