View source: R/plot.variance.R
plot.variance | R Documentation |
Shows the explained variance for a reduction for selecting how many dimensions to use downstream
## S3 method for class 'variance' plot(object, assay, reduction, ...)
object |
IBRAP S4 class object |
assay |
Character. String containing indicating which assay to use |
reduction |
Character. Which reductions to access within the supplied assays |
... |
Arguments to be passed to ggpubr::ggarrange |
Plots showing the supplied reductions explained variance
object <- plot.variance(object = object, assay = c('SCT', 'SCRAN', 'SCANPY'), reduction = 'pca')
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.