Description Usage Arguments Details
Whenever there are too many sequences, difficulties may arise when the distance matrix is being calculated. The problem is described in more detail: http://stackoverflow.com/questions/15929936/problem-with-big-data-during-computation-of-sequence-distances-using-tramine
1 | stratifiedSeqSample(data.rshp, factor = 0.1)
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data.rshp |
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factor |
The relative sample size (defaults to 0.1). |
Here, a stratified sub-sampling approach is follows. This ensures that sequence distribution is maintained.
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