find.top.variant: Find top variants in a gene region that satisfy a MAF cutoff;
In dajiangliu/rareGWAMA: Meta-Analysis of Gene-level Rare Variant Association Test in Whole Genome Datasets
Description
Find top variants in a gene region that satisfy a MAF cutoff;
Usage
1
2
find.top.variant(candidate.variant.vec, window.size, singlevar.result,
pval.cutoff = 3.1e-07)
Arguments
window.size
The size of window, default is 1e6
singlevar.result
Single varinat association results;
pval.cutoff
The cutoffs of p-values;
candidate.vairant.vec
The vector of candidate variant;
dajiangliu/rareGWAMA documentation built on Sept. 13, 2019, 9:14 a.m.
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Description
Find top variants in a gene region that satisfy a MAF cutoff;
Usage
1 2 | find.top.variant(candidate.variant.vec, window.size, singlevar.result,
pval.cutoff = 3.1e-07)
|
Arguments
window.size |
The size of window, default is 1e6 |
singlevar.result |
Single varinat association results; |
pval.cutoff |
The cutoffs of p-values; |
candidate.vairant.vec |
The vector of candidate variant; |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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