rareGWAMA.TWAS: perform single tissue twas and multiple tissue twas;

In dajiangliu/rareGWAMA: Meta-Analysis of Gene-level Rare Variant Association Test in Whole Genome Datasets

Description

perform single tissue twas and multiple tissue twas;

Usage

rareGWAMA.TWAS(score.stat.file, imp.qual.file, vcf.ref.file, transcript, ...)

Arguments

score.stat.file	the file names of score statistic files;
imp.qual.file	the file names of imputation quality;
vcf.ref.file	the file names of the reference panel file;
transcript	The list of transcript for twas;

Value

formatted data and assocation testing results;

dajiangliu/rareGWAMA documentation built on Sept. 13, 2019, 9:14 a.m.