plot_singlepeptides: Plot the number of protein(s) to which each peptide maps to.

In demar01/RIC: RIC (RNA interaction capture)

Description

plot_singlepeptides generates a stacked barplot with of protein(s) to which peptides map to.

Usage

plot_singlepeptides(Qfeature, SV_seq, ProtFeatures, ENSG = TRUE, plot = TRUE)

Arguments

Qfeature	QFeatures, Data object.
SV_seq	AAStringSet, DNAString object.
ProtFeatures	list, ProtFeatures$ProtSeq us a DNAString object.
ENSG	Logical, Whether or not peptide-mapping proteins are mapped to genes.
plot	Logical(1), If TRUE (default) the stacked barplot is produced.

Value

a stacked bar chart

Examples

if(interactive()){
plot_singlepeptides(QWCLpeptidesfiltered_clean,SV_seq,ProtFeatures)
}

demar01/RIC documentation built on Feb. 10, 2021, 5:25 p.m.