semiq_cRIC: Enables the analysis of proteins with intensity values in at...
In demar01/RIC: RIC (RNA interaction capture)

semiq_cRIC returns a tabular data with one additional summary column per sample that contains the number of detectable intensity values.

1	semiq_cRIC(aggregated_peptides, condition, relative, updown)

`aggregated_peptides`	Dataframe output from `agregate_singlepeptides`
`condition`	Character, Condition to perform semi-quantitative analysis on
`relative`	Character, Condition to perform semi-quantitative analysis against
`updown`	Integer, Threshold for FC to keep semi-quantitative values

Dataframe with semi-quantitative values

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if(interactive()){
 semiq_cRIC(aggregatedRIC,condition = "hour4",relative = "mock" ,updown=2 )
}

demar01/RIC documentation built on Feb. 10, 2021, 5:25 p.m.

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README.md

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