archs4_file_info: Retrieves a table of files that back an Archs4Repository
In denalitherapeutics/archs4: Wrappers to query and extract ARCHS4 data
Description
A yaml iskept in the Archs4 data directory (getOption("archs4.datadir"))
that links keys, (ie. mouse_gene) to the name of the file in the directory.
This abstraction is introduced so that the version of these files can be
updated with new downloads, and the user simply has to modify the yaml file
so that they are used downstream
Reference the "ARCHS4 Data Download" section in the vignette for more
information.
Usage
1
2
3
file_info(x)
archs4_file_info(datadir = getOption("archs4.datadir"))
Arguments
x
an Archs4Repository
datadir
the directory that stores the ARCHS4 data files
denalitherapeutics/archs4 documentation built on May 17, 2019, 1:29 p.m.
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Description
A yaml iskept in the Archs4 data directory (getOption("archs4.datadir"))
that links keys, (ie. mouse_gene) to the name of the file in the directory.
This abstraction is introduced so that the version of these files can be
updated with new downloads, and the user simply has to modify the yaml file
so that they are used downstream
Reference the "ARCHS4 Data Download" section in the vignette for more information.
Usage
1 2 3 | file_info(x)
archs4_file_info(datadir = getOption("archs4.datadir"))
|
Arguments
x |
an |
datadir |
the directory that stores the ARCHS4 data files |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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