Description Usage Arguments Value Examples
This funciton facilitates exploratory data analyses by trying to find gene or transcripts by different type of identifiers (symbol, ensembl_id, etc).
1 | feature_lookup(x, query, feature_type = "gene", source = "human", ...)
|
x |
An Archs4Repository |
query |
a character string of feature names to look for |
feature_type |
"gene" or "transcript" |
source |
organism dataset to lookup |
a tibble of features that match against the query. The first column
is the value of the query itself. If no match is found for a query, its
row is all NA
.
1 2 3 | a4 <- Archs4Repository()
features <- feature_lookup(a4, c("CFAP65", "PECR", "ENSG00000131408"),
feature_type = "gene", source ="human")
|
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