Description Usage Arguments Value Examples
Queries NCBI GEO's REST interface to retrieve e.g. title, summary and the list of samples for a GEO series.
1 2 | lookup_gse(accession, fields = c("Accession", "Title", "Summary",
"Overall-Design", "Type", "Pubmed-ID", "Sample"), ...)
|
accession |
Scalar character, GEO series identifier e.g. GSE109171 |
fields |
Character vector specifying which fields to extract from the XML file returned by GEO |
... |
Additional arguments passed on to the |
List the requested fields
1 2 3 | if (interactive()) {
lookup_gse("GSE109171")
}
|
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