binary_summary: Summarising binary classification results

In desmchoy/BinaryClust: CyTOF Analysis Pipeline Using Binary Classification Followed by Clustering

Summarising binary classification results

Description

This function summarises binary classification results from binary_class. Returns a data frame of median expression values of all markers, abundance and percentage abundance for all user-defined cell types

Usage

binary_summary(data = NULL, binary.results = NULL)

Arguments

data	(Required) Data in data frame format. Expects results from load_data
binary.results	(Required) Cell type results in data frame format. Expects results from binary_class

Examples

binary.summary <- binary_summary(data, binary.results)

desmchoy/BinaryClust documentation built on Sept. 14, 2024, 12:03 a.m.