plot_cluster_heatmap: Plotting heatmaps for post-binary classification clustering...

In desmchoy/BinaryClust: CyTOF Analysis Pipeline Using Binary Classification Followed by Clustering

Plotting heatmaps for post-binary classification clustering results

Description

This function plots a heatmap of clusters of a user-specified cell type. To be used after running cluster_subsets. Returns a graph.

Usage

plot_cluster_heatmap(data = NULL, cluster.results = NULL, cell.type = NULL)

Arguments

data	(Required) Data in data frame format. Expects results from load_data
cluster.results	(Required) Clustering results in data frame format. Expects results from cluster_subsets
cell.type	(Required) Cell subset to be plotted. This must be an entry from the binary classification specification

Examples

plot_cluster_heatmap(data, cluster.results, 'T Cells, CD4')

desmchoy/BinaryClust documentation built on Sept. 14, 2024, 12:03 a.m.