contigHap: Assembles the contig haplotype from a phased vcf
In dinmatias/reconproGS:
Description
Usage
Arguments
Value
Examples
Description
Merge SNPs from the same contig to generate haplotype data; the vcf
file must be phased.
Usage
1
Arguments
filePath
full path to the vcf file; this calls the vcfLoad
dataIn
data.table obtained using vcfLoad function
Value
A data.table with the contig name, sample id and haplotype.
Examples
1
# To follow
dinmatias/reconproGS documentation built on May 19, 2019, 1:43 a.m.
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Description Usage Arguments Value Examples
Description
Merge SNPs from the same contig to generate haplotype data; the vcf file must be phased.
Usage
1 |
Arguments
filePath |
full path to the vcf file; this calls the vcfLoad |
dataIn |
data.table obtained using vcfLoad function |
Value
A data.table with the contig name, sample id and haplotype.
Examples
1 | # To follow
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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