evenRunSum: evenRunSum

In drighelli/DEScan2: Differential Enrichment Scan 2

evenRunSum

Description

this function computes a running sum over x with a window width k (modified from S4Vectors package to work on even k, in such a case it adds a length at the end of the output Rle).

Usage

evenRunSum(x, k, endrule = c("drop", "constant"), na.rm = FALSE)

Arguments

x	an Rle object, typically a coverage object.
k	window dimension for the running sum over x.
endrule	refer to S4Vectors::runSum.
na.rm	refer to S4Vectors::runSum.

Value

an Rle within the running sum over x with a win of length k.

drighelli/DEScan2 documentation built on March 21, 2023, 3:06 p.m.