readBamAsBed: readBamAsBed
In drighelli/DEScan2: Differential Enrichment Scan 2
readBamAsBed R Documentation
readBamAsBed
Description
read a bam file into a bed like format.
forcing UCSC format for chromosomes names.
Usage
readBamAsBed(file)
Arguments
file
Character indicating path to bam file.
Value
GRanges object.
Examples
files <- list.files(system.file("extdata/bam", package="DEScan2"),
full.names=TRUE)
gr <- readBamAsBed(files[1])
drighelli/DEScan2 documentation built on March 21, 2023, 3:06 p.m.
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| readBamAsBed | R Documentation |
readBamAsBed
Description
read a bam file into a bed like format. forcing UCSC format for chromosomes names.
Usage
readBamAsBed(file)
Arguments
file |
Character indicating path to bam file. |
Value
GRanges object.
Examples
files <- list.files(system.file("extdata/bam", package="DEScan2"),
full.names=TRUE)
gr <- readBamAsBed(files[1])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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