pslIsProtein: is the psl alignment from a protein?
In drmjc/blat: Import/Export functions for UCSC genome BLAT alignments
Description
Usage
Arguments
Value
Author(s)
Examples
Description
fixed the bug on the - strand where psl$"T end" - (_ +
3*_)
Usage
1
pslIsProtein(psl)
Arguments
psl
a PSL object
Value
logical
Author(s)
Mark Cowley, 12 April 2006
Examples
1
2
3
4
5
6
f <- file.path(system.file(package="blat"), "examples", "test.psl")
psl <- import.psl(f, score=FALSE)[1:5,]
pslIsProtein(psl)
psl <- import.psl(f, score=TRUE)[1:5,]
pslIsProtein(psl)
drmjc/blat documentation built on May 15, 2019, 2:22 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
fixed the bug on the - strand where psl$"T end" - (_ + 3*_)
Usage
1 | pslIsProtein(psl)
|
Arguments
psl |
a PSL object |
Value
logical
Author(s)
Mark Cowley, 12 April 2006
Examples
1 2 3 4 5 6 | f <- file.path(system.file(package="blat"), "examples", "test.psl")
psl <- import.psl(f, score=FALSE)[1:5,]
pslIsProtein(psl)
psl <- import.psl(f, score=TRUE)[1:5,]
pslIsProtein(psl)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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