pslPercentIdentity2: calculate the % identity of a psl alignment V2
In drmjc/blat: Import/Export functions for UCSC genome BLAT alignments
Description
Usage
Arguments
Author(s)
Description
calculate the % identity of a psl alignment V2
Usage
1
pslPercentIdentity2(psl, isMrna = !pslIsProtein(psl))
Arguments
psl
a PSL object
isMrna
logical: protein scores are 3x size of
mrna/nucleotide scores.
Author(s)
Mark Cowley, 12 April 2006
drmjc/blat documentation built on May 15, 2019, 2:22 p.m.
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Description Usage Arguments Author(s)
Description
calculate the % identity of a psl alignment V2
Usage
1 | pslPercentIdentity2(psl, isMrna = !pslIsProtein(psl))
|
Arguments
psl |
a PSL object |
isMrna |
logical: protein scores are 3x size of mrna/nucleotide scores. |
Author(s)
Mark Cowley, 12 April 2006
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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