findOptimalClusters: finds optimal clusters within samples and matches them across...
In dyohanne/RepAn: Differential abundance Analysis for deep sequenced immune repertoire (Repseq) datasets
View source: R/RepDaAnalysisFns.R
findOptimalClusters R Documentation
finds optimal clusters within samples and matches them across samples
Description
finds optimal clusters within samples and matches them across samples
Usage
findOptimalClusters(repSeqObj, k, clusterby = "NT", kmerWidth = 4,
posWt = F, distMethod = "euclidean", useDynamicTreeCut = T,
matchingMethod = c("hc", "km", "og"), hcmethod = "complete")
dyohanne/RepAn documentation built on Feb. 3, 2023, 2:41 p.m.
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View source: R/RepDaAnalysisFns.R
| findOptimalClusters | R Documentation |
finds optimal clusters within samples and matches them across samples
Description
finds optimal clusters within samples and matches them across samples
Usage
findOptimalClusters(repSeqObj, k, clusterby = "NT", kmerWidth = 4,
posWt = F, distMethod = "euclidean", useDynamicTreeCut = T,
matchingMethod = c("hc", "km", "og"), hcmethod = "complete")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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