CellComm: The CellComm class.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

The CellComm class.

Description

An S4 class to represent the CellRouter object and its contents.

Initialize CellComm object with no stored data.

Usage

## S4 method for signature 'CellComm'
initialize(.Object)

Arguments

.Object

object.

Details

The objetct is used to analyse and find pathways of protein-protein interaction connecting proteins in the surface to the proteins involved in the transcriptional regulation.

Value

CellComm object.

Slots

expdata

data frame;

ndata

data frame;

sampTab

data frame;

rdimension

data frame;

graph

list;

signatures

list;

foldchange

list;

sources

character;

targets

character;

directory

list;

paths

data frame;

networks

list;

genes.trajectory

character vector;

pathsinfo

list;

dynamics

list;

clusters

list;

correlation

list;

top.correlations

list;

davidenrichment

list;

pathwayenrichment

list;

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.