correlationPseudotime-methods: Compute the correlation of each gene along the trajectories.
In edroaldo/fusca: Framework for Unified Single-Cell Analysis
correlationPseudotime R Documentation
Compute the correlation of each gene along the trajectories.
Description
Computes the correlation between the gene expression and the pseudotime of
for each trajectory using a specified method.
Usage
correlationPseudotime(object, type = c("slope", "spearman", "pearson"))
## S4 method for signature 'CellRouter'
correlationPseudotime(object, type = c("slope", "spearman", "pearson"))
Arguments
object
CellRouter object.
type
character; correlation method: linear regression (slope),
spearman or pearson.
Value
CellRouter object with the correlation slot updated.
edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| correlationPseudotime | R Documentation |
Compute the correlation of each gene along the trajectories.
Description
Computes the correlation between the gene expression and the pseudotime of for each trajectory using a specified method.
Usage
correlationPseudotime(object, type = c("slope", "spearman", "pearson"))
## S4 method for signature 'CellRouter'
correlationPseudotime(object, type = c("slope", "spearman", "pearson"))
Arguments
object |
CellRouter object. |
type |
character; correlation method: linear regression (slope), spearman or pearson. |
Value
CellRouter object with the correlation slot updated.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.