CreateCellRouter: Create CellRouter.

In edroaldo/fusca: Framework for Unified Single-Cell Analysis

Create CellRouter.

Description

Create the object and check its parameters.

Usage

CreateCellRouter(
  rawdata,
  assay.type = "RNA",
  min.genes,
  min.cells,
  is.expr = 0
)

Arguments

rawdata	AnyMatrix; raw data, cells should be represented as columns, genes should be represented as rows.
assay.type	character; the type of data provided to the CellRouter object.
min.genes	numeric; minimum of genes a cell should express for it to be considered.
min.cells	numeric; minimum of cells in which a gene should be expressed for it to be considered.
is.expr	numeric; the minimum expression value a gene should have to be considered expressed.

edroaldo/fusca documentation built on March 1, 2023, 1:43 p.m.