blast.menu: BLAST sequence and go through menu loops
In egmg726/crisscrosslinker: An R package for protein interaction analysis
Description
This function will BLAST the given sequence and give the user an interactive menu to select the best option.
Usage
1
blast.menu(sequence, database = "pdb", time_out = NULL)
Arguments
sequence
Sequence as a vector or string to be used to BLAST against
database
Menu selected for blast.pdb(). Options: "pdb","nr", or "swissprot". Defaults to "pdb".
time_out
Integer indicating time in seconds the blast.pdb() will search before time out occurs. Defaults to
egmg726/crisscrosslinker documentation built on Jan. 23, 2021, 1:50 a.m.
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Description
This function will BLAST the given sequence and give the user an interactive menu to select the best option.
Usage
1 | blast.menu(sequence, database = "pdb", time_out = NULL)
|
Arguments
sequence |
Sequence as a vector or string to be used to BLAST against |
database |
Menu selected for blast.pdb(). Options: "pdb","nr", or "swissprot". Defaults to "pdb". |
time_out |
Integer indicating time in seconds the blast.pdb() will search before time out occurs. Defaults to |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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