go_through_menu_loops: BLAST sequence and go through menu loops

In egmg726/crisscrosslinker: An R package for protein interaction analysis

Description

This function will BLAST the given sequence and give the user an interactive menu to select the best option.

Usage

go_through_menu_loops(fasta_sequence_vector, database = "pdb", time_out = NULL)

Arguments

fasta_sequence_vector	Sequence as a vector to be used to BLAST against
database	Menu selected for blast.pdb(). Options: "pdb","nr", or "swissprot". Defaults to "pdb".
time_out	Integer indicating time in seconds the blast.pdb() will search before time out occurs. Defaults to

egmg726/crisscrosslinker documentation built on Jan. 23, 2021, 1:50 a.m.