color.pymol: Color PyMol

In egmg726/crisscrosslinker: An R package for protein interaction analysis

Description

Generate colors to be used when generating a PyMol script

Usage

color.pymol(
  vars,
  colors = NULL,
  png.name = "pymol_legend%03d.svg",
  gray0 = FALSE,
  print.legend = TRUE,
  start.num = 1
)

Arguments

vars	List of variables to be used
colors	List of either PyMol colors, hexcodes, or standard colors in R. Will also accept color palette names from RColorBrewer and viridis. If left as NULL, will use standard PyMOL tint colors.
png.name	Name of the legend output. Defaults to "pymol_legend.jpg" unless otherwise specified.
gray0	If TRUE, will shift color palette and replace 1st color as gray (corresponds 0 if using frequency). Defaults to FALSE.
start.num	Starting number for custom color, change if additional custom colors are being used

Author(s)

Emma Gail

egmg726/crisscrosslinker documentation built on Jan. 23, 2021, 1:50 a.m.