Files in ehrlinger/ggRFVignette
Vignettes for ggRandomForests package
.Rbuildignore
.Rhistory
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
R/interaction_data.R
R/partial_coplot_data.R
R/partial_data.R
R/partial_surface_data.R
R/rfsrc_data.R
R/varsel_data.R
README.md
Sweave.sty
ggRFVignette.Rproj
ggRandomForests-regression/Regression-rfsrc.Rmd
ggRandomForests-regression/Regression-rfsrc.pdf
ggRandomForests-regression/Regression-rfsrc.tex
ggRandomForests-regression/Regression-rfsrc_cache/latex/__packages
ggRandomForests-regression/Regression-rfsrc_cache/latex/interactions_0568dc0856f8e14f1de67cf1c08f84fc.RData
ggRandomForests-regression/Regression-rfsrc_cache/latex/interactions_0568dc0856f8e14f1de67cf1c08f84fc.rdb
ggRandomForests-regression/Regression-rfsrc_cache/latex/interactions_0568dc0856f8e14f1de67cf1c08f84fc.rdx
ggRandomForests-regression/Regression-rfsrc_cache/latex/partial_062998fce2ca0ae2d93ad602e310f56f.RData
ggRandomForests-regression/Regression-rfsrc_cache/latex/partial_062998fce2ca0ae2d93ad602e310f56f.rdb
ggRandomForests-regression/Regression-rfsrc_cache/latex/partial_062998fce2ca0ae2d93ad602e310f56f.rdx
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-copl2_522dd3e565f509814abe886c7f3e127b.RData
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-copl2_522dd3e565f509814abe886c7f3e127b.rdb
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-copl2_522dd3e565f509814abe886c7f3e127b.rdx
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-copl_a3fc2019bb684eaf0ce9f869351ee796.RData
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-copl_a3fc2019bb684eaf0ce9f869351ee796.rdb
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-copl_a3fc2019bb684eaf0ce9f869351ee796.rdx
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-surface_5e9e837b415172db5b1f1ce6434dde2f.RData
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-surface_5e9e837b415172db5b1f1ce6434dde2f.rdb
ggRandomForests-regression/Regression-rfsrc_cache/latex/prtl-surface_5e9e837b415172db5b1f1ce6434dde2f.rdx
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/chas-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/contour3d-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/coplots-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/coplots2-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/eda-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/error-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/interactions-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/minimaldepth-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/minimalvimp-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/partial-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/prtl-coplots-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/prtl-coplots2-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/rfsrc-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/surface3d-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/variable-1.pdf
ggRandomForests-regression/Regression-rfsrc_files/figure-latex/vimp-1.pdf
ggRandomForests-regression/ggRandomForestsRMD.bib
ggRandomForests-regression/jss.bst
ggRandomForests-regression/jss.cls
ggRandomForests-regression/jsslogo.jpg
ggRandomForests-survival/Sweave.sty
ggRandomForests-survival/ggRandomForests-survival.Rmd
ggRandomForests-survival/ggRandomForests-survival.aux
ggRandomForests-survival/ggRandomForests-survival.bbl
ggRandomForests-survival/ggRandomForests-survival.blg
ggRandomForests-survival/ggRandomForests-survival.log
ggRandomForests-survival/ggRandomForests-survival.out
ggRandomForests-survival/ggRandomForests-survival.pdf
ggRandomForests-survival/ggRandomForests-survival.tex
ggRandomForests-survival/ggRandomForests-survival_cache/latex/__packages
ggRandomForests-survival/ggRandomForests-survival_cache/latex/pbc-partial_58415752984266da48d17e53f43e34a7.RData
ggRandomForests-survival/ggRandomForests-survival_cache/latex/pbc-partial_58415752984266da48d17e53f43e34a7.rdb
ggRandomForests-survival/ggRandomForests-survival_cache/latex/pbc-partial_58415752984266da48d17e53f43e34a7.rdx
ggRandomForests-survival/ggRandomForests-survival_cache/latex/surface3d_5bddf845266a6597d5215e1dc7c25f1c.RData
ggRandomForests-survival/ggRandomForests-survival_cache/latex/surface3d_5bddf845266a6597d5215e1dc7c25f1c.rdb
ggRandomForests-survival/ggRandomForests-survival_cache/latex/surface3d_5bddf845266a6597d5215e1dc7c25f1c.rdx
ggRandomForests-survival/ggRandomForests-survival_cache/latex/timeSurface3d_6b74bebface7e1885bcd3cdc21cfe111.RData
ggRandomForests-survival/ggRandomForests-survival_cache/latex/timeSurface3d_6b74bebface7e1885bcd3cdc21cfe111.rdb
ggRandomForests-survival/ggRandomForests-survival_cache/latex/timeSurface3d_6b74bebface7e1885bcd3cdc21cfe111.rdx
ggRandomForests-survival/ggRandomForests.bib
ggRandomForests-survival/jss.bst
ggRandomForests-survival/jss.cls
ggRandomForests-survival/jsslogo.jpg
ggRandomForests-survival/rfs-albumin-bili-1.pdf
ggRandomForests-survival/rfs-albumin-coplot-1.pdf
ggRandomForests-survival/rfs-bili-albumin-1.pdf
ggRandomForests-survival/rfs-bili-coplot-1.pdf
ggRandomForests-survival/rfs-categoricalEDA-1.pdf
ggRandomForests-survival/rfs-categoricalEDA-1.png
ggRandomForests-survival/rfs-continuousEDA-1.pdf
ggRandomForests-survival/rfs-continuousEDA-1.png
ggRandomForests-survival/rfs-coplot_bilirubin-1.pdf
ggRandomForests-survival/rfs-depthVimp-1.pdf
ggRandomForests-survival/rfs-depthVimp-1.png
ggRandomForests-survival/rfs-errorPlot-1.pdf
ggRandomForests-survival/rfs-errorPlot-1.png
ggRandomForests-survival/rfs-gg_survival-bili-1.pdf
ggRandomForests-survival/rfs-gg_survival-bili-1.png
ggRandomForests-survival/rfs-interactionPanel-1.pdf
ggRandomForests-survival/rfs-mindepth-plot-1.pdf
ggRandomForests-survival/rfs-mindepth-plot-1.png
ggRandomForests-survival/rfs-pbc-partial-edema-1.pdf
ggRandomForests-survival/rfs-pbc-partial-edema-1.png
ggRandomForests-survival/rfs-pbc-partial-panel-1.pdf
ggRandomForests-survival/rfs-pbc-partial-panel-1.png
ggRandomForests-survival/rfs-plot_gg_cum_hazard-1.pdf
ggRandomForests-survival/rfs-plot_gg_cum_hazard-1.png
ggRandomForests-survival/rfs-plot_gg_survival-1.pdf
ggRandomForests-survival/rfs-plot_gg_survival-1.png
ggRandomForests-survival/rfs-predictPlot-1.pdf
ggRandomForests-survival/rfs-predictPlot-1.png
ggRandomForests-survival/rfs-rf-vimp-1.pdf
ggRandomForests-survival/rfs-rf-vimp-1.png
ggRandomForests-survival/rfs-rfsrc-mean2-1.pdf
ggRandomForests-survival/rfs-rfsrc-mean2-1.png
ggRandomForests-survival/rfs-rfsrc-plot-1.pdf
ggRandomForests-survival/rfs-rfsrc-plot-1.png
ggRandomForests-survival/rfs-rfsrc-plot3Mnth-1.pdf
ggRandomForests-survival/rfs-rfsrc-plot3Mnth-1.png
ggRandomForests-survival/rfs-surface3d-1.pdf
ggRandomForests-survival/rfs-timeSurface3d-1.pdf
ggRandomForests-survival/rfs-var_dep-1.pdf
ggRandomForests-survival/rfs-variable-plot-1.pdf
ggRandomForests-survival/rfs-variable-plot-1.png
ggRandomForests-survival/rfs-variable-plotCat-1.pdf
ggRandomForests-survival/rfs-variable-plotCat-1.png
ggRandomForests-survival/rfs-variable-plotbili-1.pdf
ggRandomForests-survival/rfs-variable-plotbili-1.png
inst/doc/Regression-rfsrc.R
inst/doc/Regression-rfsrc.Rmd
inst/doc/Regression-rfsrc.html
inst/doc/randomForest.R
inst/doc/randomForest.Rmd
inst/doc/randomForest.html
man/interaction_data.Rd
man/partial_coplot_data.Rd
man/partial_data.Rd
man/partial_surface_data.Rd
man/rfsrc_data.Rd
man/varsel_data.Rd
tests/test-all.R
tests/testthat/test_cache_rfsrc_datasets.R
tests/testthat/test_gg_error.R
tests/testthat/test_gg_interaction.R
tests/testthat/test_gg_minimal_depth.R
tests/testthat/test_gg_minimal_vimp.R
tests/testthat/test_gg_partial.R
tests/testthat/test_gg_partial_coplot.R
tests/testthat/test_gg_rfsrc.R
tests/testthat/test_gg_roc.R
tests/testthat/test_gg_survival.R
tests/testthat/test_gg_variable.R
tests/testthat/test_gg_vimp.R
tests/testthat/test_lint.R
tests/testthat/test_partial.rfsrc.R
tests/testthat/test_quantile_pts.R
tests/testthat/test_shift.R
tests/testthat/test_surface_matrix.R
vignettes/Regression-rfsrc.Rmd
vignettes/Sweave.sty
vignettes/fig-rfs/rfs-albumin-bili-1.pdf
vignettes/fig-rfs/rfs-albumin-bili-1.png
vignettes/fig-rfs/rfs-albumin-coplot-1.pdf
vignettes/fig-rfs/rfs-albumin-coplot-1.png
vignettes/fig-rfs/rfs-bili-albumin-1.pdf
vignettes/fig-rfs/rfs-bili-albumin-1.png
vignettes/fig-rfs/rfs-bili-coplot-1.pdf
vignettes/fig-rfs/rfs-bili-coplot-1.png
vignettes/fig-rfs/rfs-categoricalEDA-1.pdf
vignettes/fig-rfs/rfs-categoricalEDA-1.png
vignettes/fig-rfs/rfs-continuousEDA-1.pdf
vignettes/fig-rfs/rfs-continuousEDA-1.png
vignettes/fig-rfs/rfs-coplot_bilirubin-1.pdf
vignettes/fig-rfs/rfs-coplot_bilirubin-1.png
vignettes/fig-rfs/rfs-depthVimp-1.pdf
vignettes/fig-rfs/rfs-depthVimp-1.png
vignettes/fig-rfs/rfs-errorPlot-1.pdf
vignettes/fig-rfs/rfs-errorPlot-1.png
vignettes/fig-rfs/rfs-gg_survival-bili-1.pdf
vignettes/fig-rfs/rfs-gg_survival-bili-1.png
vignettes/fig-rfs/rfs-interactionPanel-1.png
vignettes/fig-rfs/rfs-mindepth-plot-1.pdf
vignettes/fig-rfs/rfs-mindepth-plot-1.png
vignettes/fig-rfs/rfs-pbc-partial-edema-1.pdf
vignettes/fig-rfs/rfs-pbc-partial-edema-1.png
vignettes/fig-rfs/rfs-pbc-partial-panel-1.pdf
vignettes/fig-rfs/rfs-pbc-partial-panel-1.png
vignettes/fig-rfs/rfs-plot_gg_cum_hazard-1.pdf
vignettes/fig-rfs/rfs-plot_gg_cum_hazard-1.png
vignettes/fig-rfs/rfs-plot_gg_survival-1.pdf
vignettes/fig-rfs/rfs-plot_gg_survival-1.png
vignettes/fig-rfs/rfs-predictPlot-1.pdf
vignettes/fig-rfs/rfs-predictPlot-1.png
vignettes/fig-rfs/rfs-rf-vimp-1.pdf
vignettes/fig-rfs/rfs-rf-vimp-1.png
vignettes/fig-rfs/rfs-rfsrc-mean2-1.pdf
vignettes/fig-rfs/rfs-rfsrc-mean2-1.png
vignettes/fig-rfs/rfs-rfsrc-plot-1.pdf
vignettes/fig-rfs/rfs-rfsrc-plot-1.png
vignettes/fig-rfs/rfs-rfsrc-plot3Mnth-1.pdf
vignettes/fig-rfs/rfs-rfsrc-plot3Mnth-1.png
vignettes/fig-rfs/rfs-surface3d-1.pdf
vignettes/fig-rfs/rfs-surface3d-1.png
vignettes/fig-rfs/rfs-timeSurface3d-1.pdf
vignettes/fig-rfs/rfs-timeSurface3d-1.png
vignettes/fig-rfs/rfs-var_dep-1.pdf
vignettes/fig-rfs/rfs-var_dep-1.png
vignettes/fig-rfs/rfs-variable-plot-1.pdf
vignettes/fig-rfs/rfs-variable-plot-1.png
vignettes/fig-rfs/rfs-variable-plotCat-1.pdf
vignettes/fig-rfs/rfs-variable-plotCat-1.png
vignettes/fig-rfs/rfs-variable-plotbili-1.pdf
vignettes/fig-rfs/rfs-variable-plotbili-1.png
vignettes/ggRandomForestsRMD.bib
vignettes/jss.cls
vignettes/randomForest.Rmd
vignettes/randomForestSRC-Survival-stp.Rmd
vignettes/randomForestSRC-Survival.Rnw
vignettes/randomForestSRC-Survival.aux
vignettes/randomForestSRC-Survival.html
vignettes/randomForestSRC-Survival.out
vignettes/randomForestSRC-Survival.pdf
vignettes/randomForestSRC-Survival.tex
