ProduceComboHeatmap.old: Produce a combination heatmap old ver
In eisascience/scCustFx: single-cell custom fxs Package

ProduceComboHeatmap.old

R Documentation

Produce a combination heatmap old ver

Description

Produce a combination heatmap old ver

Usage

ProduceComboHeatmap.old(
  SerObj,
  markerVec,
  pairedList,
  pairedList2 = NULL,
  labelColumn,
  prefix,
  adtoutput = "unpaired",
  rowsplit = NULL,
  columnsplit = NULL,
  size,
  coldend = TRUE,
  rowdend = TRUE,
  coldendside = "bottom",
  rowdendside = "left",
  row_names_side = "left",
  column_names_side = "bottom",
  fontsize = 12,
  titlefontsize = 20,
  gap = 0,
  show_column_dend = T,
  show_row_dend = T
)

Arguments

`SerObj`	A seurat object
`markerVec`	A vector of markers
`pairedList`	A list of paired data
`pairedList2`	A second list of paired data
`labelColumn`	Column name for sample labels
`prefix`	Prefix for output file names
`adtoutput`	Output type (default: "unpaired")
`rowsplit`	Split data by row (default: NULL)
`columnsplit`	Split data by column (default: NULL)
`size`	Plot size
`coldend`	Show dendrogram for columns (default: TRUE)
`rowdend`	Show dendrogram for rows (default: TRUE)
`coldendside`	Side to place column dendrogram (default: "bottom")
`rowdendside`	Side to place row dendrogram (default: "left")
`fontsize`	Font size (default: 12)
`titlefontsize`	Title font size (default: 20)
`gap`	Gap between panels (default: 0)