RunHarmony: RunHarmony

In eisascience/scCustFx: single-cell custom fxs Package

RunHarmony

Description

RunHarmony

Usage

RunHarmony(
  SerObj = NULL,
  batch = "batch",
  dims = 10,
  runningTime = FALSE,
  verbose = FALSE,
  ...
)

Arguments

SerObj	A seurat SerObj to correct batch effects.
batch	Batch labels.
dims	Dimensions to use in the correction.
runningTime	Return the running time.
verbose	Print verbose.
...	Arguments passed to other methods.

Value

Seurat SerObj with the corrected data in the 'harmony' reduction.

eisascience/scCustFx documentation built on June 2, 2025, 3:59 a.m.