RunSilhouette: RunSilhouette
In eisascience/scCustFx: single-cell custom fxs Package
RunSilhouette R Documentation
RunSilhouette
Description
RunSilhouette
Usage
RunSilhouette(SerObj = NULL, batch = "celltype", reduction = "pca", dims = 10)
Arguments
SerObj
A seurat SerObj to correct batch effects.
batch
Batch labels.
reduction
Reduction to use.
dims
Number of dimensions to use.
Value
Silhouette width score.
eisascience/scCustFx documentation built on June 2, 2025, 3:59 a.m.
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| RunSilhouette | R Documentation |
RunSilhouette
Description
RunSilhouette
Usage
RunSilhouette(SerObj = NULL, batch = "celltype", reduction = "pca", dims = 10)
Arguments
SerObj |
A seurat SerObj to correct batch effects. |
batch |
Batch labels. |
reduction |
Reduction to use. |
dims |
Number of dimensions to use. |
Value
Silhouette width score.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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