SubsetSerByCoordinates: SubsetSerByCoordinates

In eisascience/scCustFx: single-cell custom fxs Package

SubsetSerByCoordinates

Description

Remove unwanted HTOS from Seurat objects

Usage

SubsetSerByCoordinates(
  SerObj,
  reduction_method = "tSNE",
  assay = "RNA",
  x_range = c(-1, 1),
  y_range = c(-1, 1)
)

Arguments

SerObj	A Seurat Object
reduction_method	an input of = c("tSNE", "UMAP", "PCA") default tSNE
x_range	an input of two numbers defining the x range default c(-1, 1)
y_range	aan input of two numbers defining the y range default c(-1, 1)

Value

A subset Seurat object.

eisascience/scCustFx documentation built on June 2, 2025, 3:59 a.m.