tax_subset: Summarises Phyloseq object to taxlevel and highest n...
In ericjcgalvez/MicrobiomeWrangler:
tax_subset R Documentation
Summarises Phyloseq object to taxlevel and highest n abundance
Description
Summarises Phyloseq object to taxlevel and highest n abundance
Usage
tax_subset(phylo, top_n, taxlev)
Arguments
phylo
phyloseq object
top_n
single numeric, prunes taxa with highest n abundance
taxlev
character. Taxonomic level.
Value
phyloseq object
ericjcgalvez/MicrobiomeWrangler documentation built on April 14, 2022, 6:33 p.m.
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| tax_subset | R Documentation |
Summarises Phyloseq object to taxlevel and highest n abundance
Description
Summarises Phyloseq object to taxlevel and highest n abundance
Usage
tax_subset(phylo, top_n, taxlev)
Arguments
phylo |
phyloseq object |
top_n |
single numeric, prunes taxa with highest n abundance |
taxlev |
character. Taxonomic level. |
Value
phyloseq object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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