ave_err_commission_and_ommission: computes the average number of non-sibs in inferred sibships

In eriqande/fullsniplings: Full sibling reconstruction from SNP data

Description

And also computes the average number of sibs missing. For each individual i in an inferred sibship this function counts the average number of "errors of commission" (number of individuals incorrectly declared to be i's sibling. And it averages over i. It also computes for each individual i the number of his true sibs missing from the sibroup he is inferred to be in. This function operates on a list of sibships

Usage

ave_err_commission_and_ommission(S, sg.list)

Arguments

S	A list of inferred sibships where individuals are named by their base-0 indices.
sg.list	A list holding the true siblings of each individual. If if Ind is the base-0 index of an individual then sg.list[[Ind+1]] is a vector of the base-0 indices of all of its full siblings

eriqande/fullsniplings documentation built on May 16, 2019, 8:45 a.m.