extendRange: Extends MAX diversity region to capture mRNAs mapping to ends...
In etheleon/mapBlat: What the package does (one line)
Description
Usage
Arguments
Details
Value
Description
extendRange to allow mapping using Blat. Ie. Full map to mRNAs which touch the ends of the contigs
Usage
1
extendRange(spanningGR, truncGR, insideGR, mRNAsize, msaLength)
Arguments
spanningGR
the spanning Genomicranges obj
truncGR
the truncated Genomicranges obj
insideGR
the inside Genomicranges obj
mRNAsize
the size of the mRNA
msaLength
the MSA length
Details
Function builds the range
Value
list
etheleon/mapBlat documentation built on May 16, 2019, 9:04 a.m.
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Description Usage Arguments Details Value
Description
extendRange to allow mapping using Blat. Ie. Full map to mRNAs which touch the ends of the contigs
Usage
1 | extendRange(spanningGR, truncGR, insideGR, mRNAsize, msaLength)
|
Arguments
spanningGR |
the spanning Genomicranges obj |
truncGR |
the truncated Genomicranges obj |
insideGR |
the inside Genomicranges obj |
mRNAsize |
the size of the mRNA |
msaLength |
the MSA length |
Details
Function builds the range
Value
list
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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