spanningOrNot: Determines nature of contigs wrt to Max Diversity Region; is...

Description Usage Arguments Details Value

Description

spanningOrNot Figures out the way the contigs map to the max diversity regions

Usage

1
spanningOrNot(gr, startLOC, endLOC)

Arguments

gr

A GRanges Object

startLOC

the start location for the region of interest

endLOC

the end location for the region of interest

Details

This function is part of a series

Value

Returns a list of GRanges Objects which are 1. spanning, 2. non-spanning or entirely inside


etheleon/mapBlat documentation built on May 16, 2019, 9:04 a.m.