generate_gwas_ss_1: Create a GWAS summary dataset
In explodecomputer/simulateGP: Functions for Simulating Genotype-Phenotype Relationships
generate_gwas_ss_1 R Documentation
Create a GWAS summary dataset
Description
Determines SE and generates effect estimates given input parameters
Usage
generate_gwas_ss_1(params, nid, vy = 1, minmaf = 0.01, r = NULL)
Arguments
params
Output from generate_gwas_params
nid
sample size
vy
Variance of trait
minmaf
minimum allowed maf. default=0.01 to prevent instability
r
LD correlation matrix. If NULL (default) then creates LD unaware sampling errors
Value
list of data frames
explodecomputer/simulateGP documentation built on April 3, 2024, 2:38 a.m.
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| generate_gwas_ss_1 | R Documentation |
Create a GWAS summary dataset
Description
Determines SE and generates effect estimates given input parameters
Usage
generate_gwas_ss_1(params, nid, vy = 1, minmaf = 0.01, r = NULL)
Arguments
params |
Output from |
nid |
sample size |
vy |
Variance of trait |
minmaf |
minimum allowed maf. default=0.01 to prevent instability |
r |
LD correlation matrix. If NULL (default) then creates LD unaware sampling errors |
Value
list of data frames
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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