get_ld | R Documentation |
Get LD matrix for a specified region from bfile reference panel
get_ld(
chr,
from,
to,
bfile,
plink_bin = genetics.binaRies::get_plink_binary(),
nref = NULL
)
chr |
Chromosome |
from |
from bp |
to |
to bp |
bfile |
LD reference panel |
plink_bin |
Plink binary default=genetics.binaRies::get_plink_binary() |
nref |
Sample size of reference panel |
List of LD matrix and map info including MAF
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