summary_set: Wrapper for generating a summary set

In explodecomputer/simulateGP: Functions for Simulating Genotype-Phenotype Relationships

Wrapper for generating a summary set

Description

Allows arbitrary sample overlap

Usage

summary_set(
  beta_gx,
  beta_gy,
  af,
  n_gx,
  n_gy,
  n_overlap,
  cor_xy,
  prev_y = NA,
  sigma_x = 1,
  sigma_y = 1
)

Arguments

beta_gx	Array of true effects on x
beta_gy	Array of true effects on y
af	Array of effect allele frequencies
n_gx	Sample size of g-x association
n_gy	Sample size of g-y association
n_overlap	Number of overlapping samples
cor_xy	Observational correlation between x and y
prev_y	Disease prevalence of y. Default = NA (in which case treated as continuous)
sigma_x	SD of x. Default=1
sigma_y	SD of y. Default=1

Value

Data frame of summary statistics for x and y

explodecomputer/simulateGP documentation built on April 3, 2024, 2:38 a.m.