fintzij/stemr: Stochastic Epidemic Model Simulation and Estimation
Version 0.1.0

Fit stochastic epidemic models using Bayesian data augmentation. Implements an agent-based data-driven data augmentation algorithm for efficient subject-level path proposals based on noisy aggregate counts at discrete observation times. Also implements approximate inference via the linear noise approximation.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.1.0
URL https://github.com/fintzij/stemr
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("fintzij/stemr")
fintzij/stemr documentation built on April 16, 2018, 8:12 a.m.