CALL_D_MEASURE: Evaluate the log-density of the measurement process by...

In fintzij/stemr: Stochastic Epidemic Model Simulation and Estimation

Evaluate the log-density of the measurement process by calling measurement process density functions via external Xptr.

Description

Evaluate the log-density of the measurement process by calling measurement process density functions via external Xptr.

Usage

CALL_D_MEASURE(
  emitmat,
  emit_inds,
  record_ind,
  record,
  state,
  parameters,
  constants,
  tcovar,
  d_meas_ptr
)

Arguments

emitmat	matrix of emission probabilities
emit_inds	logical vector of measurement compartments to simulate
record_ind	row in the observation and emission matrices
record	vector of observed counts
state	numeric vector of latent comaprtment counts
parameters	numeric vector of parameter values
constants	numeric vector of constants
tcovar	numeric vector of time-varying covariate values
d_meas_ptr	external pointer to measurement process simulation function

fintzij/stemr documentation built on March 25, 2022, 12:25 p.m.