build_rate_adjmat: Construct an adjacency matrix for specifying which rates must...
In fintzij/stemr: Stochastic Epidemic Model Simulation and Estimation
View source: R/build_rate_adjmat.R
build_rate_adjmat R Documentation
Construct an adjacency matrix for specifying which rates must be updated when
a transition occurs, with adjacency determined at the lumped population
level.
Description
Constructs an adjacency matrix with rates given in the rows, and reactions on
which they each depend given in columns. Thus, when a reaction occurs, all of
the non-zero entries in the corresponding column must be updated.
Usage
build_rate_adjmat(rates, compartment_codes)
Arguments
rates
intermediate list of rate functions created within the
stem_dynamics function
compartment_codes
vector of compartment codes.
Value
adjacency matrix
fintzij/stemr documentation built on March 25, 2022, 12:25 p.m.
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View source: R/build_rate_adjmat.R
| build_rate_adjmat | R Documentation |
Construct an adjacency matrix for specifying which rates must be updated when a transition occurs, with adjacency determined at the lumped population level.
Description
Constructs an adjacency matrix with rates given in the rows, and reactions on which they each depend given in columns. Thus, when a reaction occurs, all of the non-zero entries in the corresponding column must be updated.
Usage
build_rate_adjmat(rates, compartment_codes)
Arguments
rates |
intermediate list of rate functions created within the stem_dynamics function |
compartment_codes |
vector of compartment codes. |
Value
adjacency matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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