extract.clade2: Extract Clades from a Phylogentic Tree
In fmichonneau/phyloch: Tools for phylogenetics and taxonomy
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
As extract.clades from the ape package, extract.clades2 keeps all the tips from a given node, and deletes all the other tips, but, in addition, can handle further, non-standard list elements of "phylo" object (i.e. vectors of length phy$Nnode, which may contain support values, ages or rate estimates, etc. ).
Usage
1
extract.clade2(phy, node)
Arguments
phy
an object of class "phylo"
node
an integer, giving the number of MRCA of the clade to be extracted
Value
An object of class "phylo".
Author(s)
Christoph Heiblbased on extract.clade by Emanuel Paradis.
See Also
Examples
1
# To be added
fmichonneau/phyloch documentation built on May 16, 2019, 1:45 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
As extract.clades from the ape package, extract.clades2 keeps all the tips from a given node, and deletes all the other tips, but, in addition, can handle further, non-standard list elements of "phylo" object (i.e. vectors of length phy$Nnode, which may contain support values, ages or rate estimates, etc. ).
Usage
1 | extract.clade2(phy, node)
|
Arguments
phy |
an object of class |
node |
an integer, giving the number of MRCA of the clade to be extracted |
Value
An object of class "phylo".
Author(s)
Christoph Heiblbased on extract.clade by Emanuel Paradis.
See Also
Examples
1 | # To be added
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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