Description Usage Arguments Value
View source: R/multiple_signatures_plot.R
This function generates a plot
1 2 3 4 5 6 7 8 9 | plot_OneReg_MultSig(
sigmat,
tf,
regulon,
color = c("salmon", "cornflowerblue"),
nes = NULL,
padj = NULL,
...
)
|
sigmat |
a matrix with genes in rows and signatures in columns. Typically a Z-score, t-statistic of log2 fold change matrix |
tf |
a character vector of a regulatory protein, used to subset regulon object |
regulon |
named regulon object similar to output of viper::aracne2regulon |
color |
Vector of two components indicating the colors for the negative and positive parts of the regulon |
nes |
numeric vector of normalized enrichment scores, must match number of columns in sigmat |
padj |
numeric vector of adjusted p-values, must match number of columns in sigmat |
Nothing, a plot is generated in the default output device
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