specific_n: For a signature matrix containing conditions/comparisons in...
In fossbert/binilib: Carlo's little helper
Description
Usage
Arguments
Value
Description
For a signature matrix containing conditions/comparisons in its columns and typically gene names
in its rows, this function will find the most specific N genes for a given condition. It will do so by
computing for each gene the difference between the individual value for in a given condition and the
maximum value among the other conditions.
Usage
1
specific_n(mat, nn = 50, verbose = TRUE)
Arguments
mat
numeric matrix
nn
integer indicating how many genes to isolate for each condition/comparison (default = 50)
verbose
logical indicating whether to message information on the process
Value
a data frame with gene names for from the rownames of the input matrix
fossbert/binilib documentation built on April 23, 2021, 10:31 p.m.
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Description Usage Arguments Value
Description
For a signature matrix containing conditions/comparisons in its columns and typically gene names in its rows, this function will find the most specific N genes for a given condition. It will do so by computing for each gene the difference between the individual value for in a given condition and the maximum value among the other conditions.
Usage
1 | specific_n(mat, nn = 50, verbose = TRUE)
|
Arguments
mat |
numeric matrix |
nn |
integer indicating how many genes to isolate for each condition/comparison (default = 50) |
verbose |
logical indicating whether to message information on the process |
Value
a data frame with gene names for from the rownames of the input matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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