vpsig_limma: viperSignature and nullmodel using limma

In fossbert/binilib: Carlo's little helper

Description

viperSignature and nullmodel using limma

Usage

vpsig_limma(eset, ref, per = 1000, keep_all = FALSE, seed = 42, verbose = TRUE)

Arguments

eset	normalized gene expression matrix with samples of interest
ref	normalized gene expression matrix with reference samples
per	integer, number of overall permutations
keep_all	logical, whether to return signature for all samples (incl. reference samples)
verbose	logical, whether to report on progress or not

fossbert/binilib documentation built on April 23, 2021, 10:31 p.m.