pathwayPCA-package: Extract and Test the Significance of Pathway-Specific...

In gabrielodom/pathwayPCA: Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection

Extract and Test the Significance of Pathway-Specific Principal Components

Description

To introduce this package, please see our "Integrative Pathway Analysis" vignette: https://gabrielodom.github.io/pathwayPCA/articles//Introduction_to_pathwayPCA.html.

The pathwayPCA package has three main components:

• Import and Tidy Data: https://gabrielodom.github.io/pathwayPCA/articles/Supplement2-Importing_Data.html

• Create Omics Data Objects https://gabrielodom.github.io/pathwayPCA/articles/Supplement3-Create_Omics_Objects.html

• Test Pathway Significance https://gabrielodom.github.io/pathwayPCA/articles/Supplement4-Methods_Walkthrough.html

• Analyze and Visualize Results https://gabrielodom.github.io/pathwayPCA/articles/Supplement5-Analyse_Results.html

For an overview of these four topics in context, please see our Quickstart Guide: https://gabrielodom.github.io/pathwayPCA/articles/Supplement1-Quickstart_Guide.html

gabrielodom/pathwayPCA documentation built on July 10, 2023, 3:32 a.m.