show-OmicsPathway-method: Display the Summary of an 'Omics*'-class Object.

In gabrielodom/pathwayPCA: Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection

Display the Summary of an Omics*-class Object.

Description

The display method for objects of class OmicsPathway, OmicsSurv, OmicsReg, or OmicsCateg.

Usage

## S4 method for signature 'OmicsPathway'
show(object)

Arguments

object

An object inheriting the super-class OmicsPathway. This class includes objects of class OmicsSurv, OmicsReg, or OmicsCateg.

Details

S4 objects print to the screen via the show function. This function sets a show method for OmicsPathway objects.

Value

A copy of object, returned invisibly (with the invisible function).

Examples

  ###  Load the Example Data  ###
  data("colonSurv_df")
  data("colon_pathwayCollection")

  ###  Create an OmicsSurv Object  ###
  colon_OmicsSurv <- CreateOmics(
    assayData_df = colonSurv_df[, -(2:3)],
    pathwayCollection_ls = colon_pathwayCollection,
    response = colonSurv_df[, 1:3],
    respType = "surv"
  )

  ###  Print / Show  ###
  colon_OmicsSurv

gabrielodom/pathwayPCA documentation built on July 10, 2023, 3:32 a.m.