API for gamerino/NBSplice
Negative Binomial Models to detect Differential Splicing
| Global functions | |
|---|---|
| GetDSGenes | Man page Man page |
| GetDSGenes,NBSpliceRes-method | Man page |
| GetDSGenes-methods | Man page |
| GetDSResults | Man page Man page |
| GetDSResults,NBSpliceRes-method | Man page |
| GetDSResults-methods | Man page |
| GetGeneResults | Man page Man page |
| GetGeneResults,NBSpliceRes-method | Man page |
| GetGeneResults-methods | Man page |
| IsoDataSet | Man page Source code |
| IsoDataSet-class | Man page |
| IsoDataSet-getters | Man page |
| IsoDataSet-methods | Man page |
| NBSplice-package | Man page |
| NBSpliceRes | Man page Source code |
| NBSpliceRes-class | Man page |
| NBSpliceRes-getters | Man page |
| NBSpliceRes-initialize | Man page |
| NBSpliceRes-lowExpIndex | Man page |
| NBSpliceRes-methods | Man page |
| NBSpliceRes-print | Man page |
| NBSpliceRes-show | Man page |
| NBTest | Man page Man page |
| NBTest,IsoDataSet-method | Man page |
| NBTest-methods | Man page |
| buildData | Man page Source code |
| buildData-methods | Man page |
| buildLowExpIdx | Man page Man page |
| buildLowExpIdx,IsoDataSet-method | Man page |
| buildLowExpIdx-methods | Man page |
| contrast | Man page Man page |
| contrast,NBSpliceRes-method | Man page |
| contrast-methods | Man page |
| designFormula | Man page Man page |
| designFormula,IsoDataSet-method | Man page |
| designFormula-methods | Man page |
| designMatrix | Man page |
| disp | Man page Man page |
| disp,NBSpliceRes-method | Man page |
| disp-methods | Man page |
| expData | Man page Man page |
| expData,IsoDataSet-method | Man page |
| expData-methods | Man page |
| fitModel | Man page Source code |
| fitModel-methods | Man page |
| geneCounts | Man page Man page |
| geneCounts,IsoDataSet-method | Man page |
| geneCounts-methods | Man page |
| geneIso | Man page |
| initialize | Man page |
| initialize,IsoDataSet-method | Man page |
| initialize,NBSpliceRes-method | Man page |
| isoCounts | Man page Man page |
| isoCounts,IsoDataSet-method | Man page |
| isoCounts-methods | Man page |
| isoCountsData | Man page |
| isoGeneRel | Man page Man page |
| isoGeneRel,IsoDataSet-method | Man page |
| isoGeneRel-methods | Man page |
| lowExpIndex | Man page Man page |
| lowExpIndex,IsoDataSet-method | Man page |
| lowExpIndex,NBSpliceRes-method | Man page |
| lowExpIndex-methods | Man page |
| myDSResults | Man page |
| myIsoDataSet | Man page |
| plotGeneResults | Man page Man page |
| plotGeneResults,NBSpliceRes-method | Man page |
| plotGeneResults-methods | Man page |
| plotRatiosDisp | Man page Man page |
| plotRatiosDisp,NBSpliceRes-method | Man page |
| plotRatiosDisp-methods | Man page |
| plotVolcano | Man page Man page |
| plotVolcano,NBSpliceRes-method | Man page |
| plotVolcano-methods | Man page |
| Man page | |
| print,IsoDataSet-method | Man page |
| print,NBSpliceRes-method | Man page |
| results | Man page Man page |
| results,NBSpliceRes-method | Man page |
| results-methods | Man page |
| show | Man page |
| show,IsoDataSet-method | Man page |
| show,NBSpliceRes-method | Man page |
| totalGeneCounts | Man page Source code |
| totalGeneCounts-methods | Man page |
