Files in genialis/shRNAde
Functions needed to support the shRNA pipeline in rewolwe-bio
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/doDE.R
R/doDE_helper_functions.R
R/makeLibrary.R
R/summaryTable.R
README.md
data/params.png
inst/extdata/template_doDE_inputs.xlsx
man/classifyDE.Rd
man/countClassified.Rd
man/differentialExpression.Rd
man/doDE.Rd
man/fetchGeneOrHairpin.Rd
man/fetchTHvalue.Rd
man/importClassificationParams.Rd
man/importContrastList.Rd
man/importExpressionsData.Rd
man/importOverallContrasts.Rd
man/importSampleKey.Rd
man/makeLibrary.Rd
man/scrapeDEresults.Rd
man/summaryTable.Rd
man/trimResults.Rd
shRNAde.Rproj
tests/testthat.R
tests/testthat/test-doDE.R
tests/testthat/test-makelibrary.R
tests/testthat/test-summarytable.R
